Faster workflows, improved yields and quality for cells, blood, tissue & bacteria Unable to view this email? [View online](
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Monarch® HMW DNA Extraction Kits NEB is pleased to announce the release of a powerful new solution for high molecular weight DNA extraction. The [Monarch HMW DNA Extraction Kits]( a novel glass bead-based approach, allowing users to extract DNA into the megabase (Mb) range quickly and easily, with best-in-class yields and purity from cells, blood, tissue and bacteria. Extracted HMW DNA is easy to dissolve and is often ready to use on the same day, significantly shortening the extraction process, which has long been a bottleneck for long read sequencing technologies. Highlights: - Fast workflows (cells: 30 minutes, blood: 60 minutes, tissue & bacteria: 90 minutes)
- Extract DNA into the megabase (Mb) range from cells, blood, soft organ tissues, and bacteria
- Tune DNA size based on agitation speed during lysis
- Reproducibly achieve excellent yields and purity
- Excellent performance in long read sequencing See how our Cells & Blood Kit works in [this short animation](
--------------------------------------------------------------- Workflow for extraction from cells --------------------------------------------------------------- Use of varying agitation speeds during lysis produces tunable fragment length of extracted HMW genomic DNA from cells and blood Preps were performed on duplicate aliquots of 1 x 106 HEK 293 cells and 500 µl fresh human blood. Samples were agitated at the indicated speed during the lysis step to control the fragmentation of the DNA. Equal amounts of DNA from the replicates (cells: 500 ng; blood: 650 ng) were resolved by PFGE (1% agarose gel, 6 V/cm, 13°C for 20 hours, switch times ramped from 0.5â94 seconds on a BioRad CHEF-DR III System). Yield and purity ratios of the individual preps are shown in the accompanying tables. Lambda PFG Ladder and Lambda DNA-Hind III Digest (NEB [#N0341]( and [#N3012]( were used as molecular weight standards. Yield, purity ratios and DINs of the individual preps are shown in the accompanying tables. --------------------------------------------------------------- Weâve had great success with obtaining HMW DNA for long read sequencing from a variety of cell types, using less input and obtaining a comparable yield⦠It is straightforward and easy to use. â Inswasti Cahyani & Matt Loose, DeepSeq, University of Nottingham
--------------------------------------------------------------- Extracted DNA from HEK293, human blood and mouse kidney samples generates excellent sequencing results on the Oxford Nanopore Technologies® platform HEK293 Sample 1 HEK293 Sample 2 Human Blood
Sample 1 Human Blood
Sample 2 Mouse Kidney
Sample
Mean read length (bases) 21338.9 19249.9 21522.6 24677.7 27120.7
Mean read quality 12.8 13.2 13.4 13.3 13
Median read length (bases) 10388 9702 10130 12593 23150
Median read quality 13.2 13.7 13.9 13.8 13.5
Number of reads 377687 633636 538090 327314 164000
Read length N50 (bases) 45432 40415 46542 51394 44631
Total bases 8.1 Gb 12.2 Gb 11.6 Gb 8.1 Gb 4.4 Gb [Learn More and
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