PNAS Table of Contents for February 25, 2020; Vol. 117, No. 8

[PNAS] [Chemistry Recruiting](/cgi/adclick/?ad=54715&adclick=true&url=https%3A%2F%2Fwww.pnas.org%2Fpage%2Fabout%2Fchemistry-call-for-papers%3Futm_source%3DPNAS%26utm_medium%3DeTOC%26utm_campaign%3Dchemistryrecruiting%26utm_content%3DChemistryCFP)   [February 25, 2020; Vol. 117, No. 8]( ) This Week in PNAS [In This Issue]( --------------------------------------------------------------- Opinion [Opinion: Sustainable development must account for pandemic risk]( Moreno Di Marco, Michelle L. Baker, Peter Daszak, Paul De Barro, Evan A. Eskew, Cecile M. Godde, Tom D. Harwood, Mario Herrero, Andrew J. Hoskins, Erica Johnson, William B. Karesh, Catherine Machalaba, Javier Navarro Garcia, Dean Paini, Rebecca Pirzl, Mark Stafford Smith, Carlos Zambrana-Torrelio, and Simon Ferrier Leading scientists discuss current issues. --------------------------------------------------------------- QnAs [QnAs with Bin Yu]( Farooq Ahmed --------------------------------------------------------------- Commentaries [Insight into the multifunctional RNA synthesis machine of rabies virus]( Ervin Fodor [A Plasmodium key fits a mosquito lock]( Sung-Jae Cha and Marcelo Jacobs-Lorena [How the brain pays attention to others’ attention]( David A. Leopold and Richard J. Krauzlis [Understanding the genetic architecture of human retinal degenerations]( J. Fielding Hejtmancik and Stephen P. Daiger [Frogs give new insights into vertebrate novelties]( Marvalee H. Wake --------------------------------------------------------------- Letters [Antibiotic treatment and selection for glpK mutations in patients with active tuberculosis disease]( Roger Vargas Jr and Maha R. Farhat [Reply to Vargas and Farhat: Mycobacterium tuberculosis glpK mutants in human tuberculosis]( Hassan Safi, David R. Sherman, Thomas Dick, and David Alland [Reduction in TOM1 expression exacerbates Alzheimer’s disease]( Jiajie Peng and Tianyi Zhao [Reply to Peng and Zhao: Loss of endocytic protein TOM1 in Alzheimer’s disease]( Alessandra C. Martini, David Baglietto-Vargas, Rodrigo Medeiros, and Frank M. LaFerla --------------------------------------------------------------- Physical Sciences Applied Physical Sciences [Anharmonic lattice dynamics and superionic transition in AgCrSe2]( Jingxuan Ding, Jennifer L. Niedziela, Dipanshu Bansal, Jiuling Wang, Xing He, Andrew F. May, Georg Ehlers, Douglas L. Abernathy, Ayman Said, Ahmet Alatas, Yang Ren, Gaurav Arya, and Olivier Delaire [Mesoscale structure of wrinkle patterns and defect-proliferated liquid crystalline phases]( Oleh Tovkach, Junbo Chen, Monica M. Ripp, Teng Zhang, Joseph D. Paulsen, and Benny Davidovitch Biophysics and Computational Biology [Molecular underpinnings of cytoskeletal cross-talk]( Angela Oberhofer, Emanuel Reithmann, Peter Spieler, Willi L. Stepp, Dennis Zimmermann, Bettina Schmid, Erwin Frey, and Zeynep Ökten [Mechanism for neurotransmitter-receptor matching]( Dena R. Hammond-Weinberger, Yunxin Wang, Alex Glavis-Bloom, and Nicholas C. Spitzer Chemistry [Opto-chemo-mechanical transduction in photoresponsive gels elicits switchable self-trapped beams with remote interactions]( Derek R. Morim, Amos Meeks, Ankita Shastri, Andy Tran, Anna V. Shneidman, Victor V. Yashin, Fariha Mahmood, Anna C. Balazs, Joanna Aizenberg, and Kalaichelvi Saravanamuttu Earth, Atmospheric, and Planetary Sciences [An unexpected catalyst dominates formation and radiative forcing of regional haze]( Fang Zhang, Yuan Wang, Jianfei Peng, Lu Chen, Yele Sun, Lian Duan, Xinlei Ge, Yixin Li, Jiayun Zhao, Chao Liu, Xiaochun Zhang, Gen Zhang, Yuepeng Pan, Yuesi Wang, Annie L. Zhang, Yuemeng Ji, Gehui Wang, Min Hu, Mario J. Molina, and Renyi Zhang [Early atmospheric contamination on the top of the Himalayas since the onset of the European Industrial Revolution]( Paolo Gabrielli, Anna Wegner, M. Roxana Sierra-Hernández, Emilie Beaudon, Mary Davis, Joel D. Barker, and Lonnie G. Thompson [Orbital pacing and secular evolution of the Early Jurassic carbon cycle]( Marisa S. Storm, Stephen P. Hesselbo, Hugh C. Jenkyns, Micha Ruhl, Clemens V. Ullmann, Weimu Xu, Melanie J. Leng, James B. Riding, and Olga Gorbanenko [The typhoon-induced drying of the Maritime Continent]( Enrico Scoccimarro, Silvio Gualdi, Alessio Bellucci, Daniele Peano, Annalisa Cherchi, Gabriel A. Vecchi, and Antonio Navarra [Isotopic evidence for quasi-equilibrium chemistry in thermally mature natural gases]( Nivedita Thiagarajan, Hao Xie, Camilo Ponton, Nami Kitchen, Brian Peterson, Michael Lawson, Michael Formolo, Yitian Xiao, and John Eiler [Early Last Interglacial ocean warming drove substantial ice mass loss from Antarctica]( Chris S. M. Turney, Christopher J. Fogwill, Nicholas R. Golledge, Nicholas P. McKay, Erik van Sebille, Richard T. Jones, David Etheridge, Mauro Rubino, David P. Thornton, Siwan M. Davies, Christopher Bronk Ramsey, Zoë A. Thomas, Michael I. Bird, Niels C. Munksgaard, Mika Kohno, John Woodward, Kate Winter, Laura S. Weyrich, Camilla M. Rootes, Helen Millman, Paul G. Albert, Andres Rivera, Tas van Ommen, Mark Curran, Andrew Moy, Stefan Rahmstorf, Kenji Kawamura, Claus-Dieter Hillenbrand, Michael E. Weber, Christina J. Manning, Jennifer Young, and Alan Cooper Engineering [Short-wavelength optoacoustic spectroscopy based on water muting]( Jaya Prakash, Mir Mehdi Seyedebrahimi, Ara Ghazaryan, Jaber Malekzadeh-Najafabadi, Vipul Gujrati, and Vasilis Ntziachristos [Harnessing transition waves to realize deployable structures]( Ahmad Zareei, Bolei Deng, and Katia Bertoldi [In situ genetic engineering of tumors for long-lasting and systemic immunotherapy]( Stephany Y. Tzeng, Kisha K. Patel, David R. Wilson, Randall A. Meyer, Kelly R. Rhodes, and Jordan J. Green Physics [Inelastic neutron scattering evidence for anomalous H–H distances in metal hydrides]( Andreas Borgschulte, Jasmin Terreni, Emanuel Billeter, Luke Daemen, Yongqiang Cheng, Anup Pandey, Zbigniew Łodziana, Russell J. Hemley, and Anibal J. Ramirez-Cuesta Statistics [Veridical data science]( Bin Yu and Karl Kumbier --------------------------------------------------------------- Social Sciences Social Sciences [Maternal cumulative prevalence measures of child mortality show heavy burden in sub-Saharan Africa]( Emily Smith-Greenaway and Jenny Trinitapoli Sustainability Science [The role of worldviews in the governance of sustainable mobility]( Frank Chuang, Ed Manley, and Arthur Petersen --------------------------------------------------------------- Biological Sciences Applied Biological Sciences [In situ genetic engineering of tumors for long-lasting and systemic immunotherapy]( Stephany Y. Tzeng, Kisha K. Patel, David R. Wilson, Randall A. Meyer, Kelly R. Rhodes, and Jordan J. Green [The primary mechanism of cytotoxicity of the chemotherapeutic agent CX-5461 is topoisomerase II poisoning]( Peter M. Bruno, Mengrou Lu, Kady A. Dennis, Haider Inam, Connor J. Moore, John Sheehe, Stephen J. Elledge, Michael T. Hemann, and Justin R. Pritchard Biochemistry [Structural analysis of a trimeric assembly of the mitochondrial dynamin-like GTPase Mgm1]( Liming Yan, Yuanbo Qi, Derek Ricketson, Lei Li, Kelly Subramanian, Jinghua Zhao, Caiting Yu, Lijie Wu, Reta Sarsam, Melissa Wong, Zhiyong Lou, Zihe Rao, Jodi Nunnari, and Junjie Hu [High-resolution neutron crystallography visualizes an OH-bound resting state of a copper-containing nitrite reductase]( Yohta Fukuda, Yu Hirano, Katsuhiro Kusaka, Tsuyoshi Inoue, and Taro Tamada [Erk1/2 inactivation promotes a rapid redistribution of COP1 and degradation of COP1 substrates]( Weiming Ouyang, Pengfei Guo, Kazuyo Takeda, Qiong Fu, Hui Fang, and David M. Frucht [Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling]( Craig Gutierrez, Ilan E. Chemmama, Haibin Mao, Clinton Yu, Ignacia Echeverria, Sarah A. Block, Scott D. Rychnovsky, Ning Zheng, Andrej Sali, and Lan Huang [Role for ribosome-associated quality control in sampling proteins for MHC class I-mediated antigen presentation]( Débora Broch Trentini, Matteo Pecoraro, Shivani Tiwary, Jürgen Cox, Matthias Mann, Mark S. Hipp, and F. Ulrich Hartl [Structural basis of the UDP-diacylglucosamine pyrophosphohydrolase LpxH inhibition by sulfonyl piperazine antibiotics]( Jae Cho, Minhee Lee, C. Skyler Cochrane, Caroline G. Webster, Benjamin A. Fenton, Jinshi Zhao, Jiyong Hong, and Pei Zhou [Basis for metabolite-dependent Cullin-RING ligase deneddylation by the COP9 signalosome]( Hong Lin, Xiaozhe Zhang, Li Liu, Qiuyu Fu, Chuanlong Zang, Yan Ding, Yang Su, Zhixue Xu, Sining He, Xiaoli Yang, Xiayun Wei, Haibin Mao, Yasong Cui, Yi Wei, Chuanzheng Zhou, Lilin Du, Niu Huang, Ning Zheng, Tao Wang, and Feng Rao Biophysics and Computational Biology [Molecular underpinnings of cytoskeletal cross-talk]( Angela Oberhofer, Emanuel Reithmann, Peter Spieler, Willi L. Stepp, Dennis Zimmermann, Bettina Schmid, Erwin Frey, and Zeynep Ökten [Short-wavelength optoacoustic spectroscopy based on water muting]( Jaya Prakash, Mir Mehdi Seyedebrahimi, Ara Ghazaryan, Jaber Malekzadeh-Najafabadi, Vipul Gujrati, and Vasilis Ntziachristos [Exploring the interplay between fibrillization and amorphous aggregation channels on the energy landscapes of tau repeat isoforms]( Xun Chen, Mingchen Chen, Nicholas P. Schafer, and Peter G. Wolynes [High-resolution structural insights into the heliorhodopsin family]( K. Kovalev, D. Volkov, R. Astashkin, A. Alekseev, I. Gushchin, J. M. Haro-Moreno, I. Chizhov, S. Siletsky, M. Mamedov, A. Rogachev, T. Balandin, V. Borshchevskiy, A. Popov, G. Bourenkov, E. Bamberg, F. Rodriguez-Valera, G. Büldt, and V. Gordeliy [Radiation damage and dose limits in serial synchrotron crystallography at cryo- and room temperatures]( Eugenio de la Mora, Nicolas Coquelle, Charles S. Bury, Martin Rosenthal, James M. Holton, Ian Carmichael, Elspeth F. Garman, Manfred Burghammer, Jacques-Philippe Colletier, and Martin Weik Cell Biology [Loss of phenotypic inheritance associated with ydcI mutation leads to increased frequency of small, slow persisters in Escherichia coli]( Suzanne M. Hingley-Wilson, Nan Ma, Yin Hu, Rosalyn Casey, Anders Bramming, Richard J. Curry, Hongying Lilian Tang, Huihai Wu, Rachel E. Butler, William R. Jacobs Jr, Andrea Rocco, and Johnjoe McFadden [Statin-induced GGPP depletion blocks macropinocytosis and starves cells with oncogenic defects]( Zhihua Jiao, Huaqing Cai, Yu Long, Orit Katarina Sirka, Veena Padmanaban, Andrew J. Ewald, and Peter N. Devreotes [Actin reduction by MsrB2 is a key component of the cytokinetic abscission checkpoint and prevents tetraploidy]( Jian Bai, Hugo Wioland, Tamara Advedissian, Frédérique Cuvelier, Guillaume Romet-Lemonne, and Arnaud Echard [The histone demethylase JMJD2B regulates endothelial-to-mesenchymal transition]( Simone F. Glaser, Andreas W. Heumüller, Lukas Tombor, Patrick Hofmann, Marion Muhly-Reinholz, Ariane Fischer, Stefan Günther, Karoline E. Kokot, David Hassel, Sandeep Kumar, Hanjoong Jo, Reinier A. Boon, Wesley Abplanalp, David John, Jes-Niels Boeckel, and Stefanie Dimmeler Developmental Biology [A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left–right patterning]( Takeshi A. Onuma, Momoko Hayashi, Fuki Gyoja, Kanae Kishi, Kai Wang, and Hiroki Nishida [Fbxo9 functions downstream of Sox10 to determine neuron-glial fate choice in the dorsal root ganglia through Neurog2 destabilization]( Jessica Aijia Liu, Andrew Tai, Jialin Hong, May Pui Lai Cheung, Mai Har Sham, Kathryn S. E. Cheah, Chi Wai Cheung, and Martin Cheung Ecology [Recent responses to climate change reveal the drivers of species extinction and survival]( Cristian Román-Palacios and John J. Wiens [Global gene flow releases invasive plants from environmental constraints on genetic diversity]( Annabel L. Smith, Trevor R. Hodkinson, Jesus Villellas, Jane A. Catford, Anna Mária Csergő, Simone P. Blomberg, Elizabeth E. Crone, Johan Ehrlén, Maria B. Garcia, Anna-Liisa Laine, Deborah A. Roach, Roberto Salguero-Gómez, Glenda M. Wardle, Dylan Z. Childs, Bret D. Elderd, Alain Finn, Sergi Munné-Bosch, Maude E. A. Baudraz, Judit Bódis, Francis Q. Brearley, Anna Bucharova, Christina M. Caruso, Richard P. Duncan, John M. Dwyer, Ben Gooden, Ronny Groenteman, Liv Norunn Hamre, Aveliina Helm, Ruth Kelly, Lauri Laanisto, Michele Lonati, Joslin L. Moore, Melanie Morales, Siri Lie Olsen, Meelis Pärtel, William K. Petry, Satu Ramula, Pil U. Rasmussen, Simone Ravetto Enri, Anna Roeder, Christiane Roscher, Marjo Saastamoinen, Ayco J. M. Tack, Joachim Paul Töpper, Gregory E. Vose, Elizabeth M. Wandrag, Astrid Wingler, and Yvonne M. Buckley [Urban warming advances spring phenology but reduces the response of phenology to temperature in the conterminous United States]( Lin Meng, Jiafu Mao, Yuyu Zhou, Andrew D. Richardson, Xuhui Lee, Peter E. Thornton, Daniel M. Ricciuto, Xuecao Li, Yongjiu Dai, Xiaoying Shi, and Gensuo Jia Evolution [Continual evolution through coupled fast and slow feedbacks]( Meike T. Wortel, Han Peters, Juan A. Bonachela, and Nils Chr. Stenseth [Genomics of sorghum local adaptation to a parasitic plant]( Emily S. Bellis, Elizabeth A. Kelly, Claire M. Lorts, Huirong Gao, Victoria L. DeLeo, Germinal Rouhan, Andrew Budden, Govinal B. Bhaskara, Zhenbin Hu, Robert Muscarella, Michael P. Timko, Baloua Nebie, Steven M. Runo, N. Doane Chilcoat, Thomas E. Juenger, Geoffrey P. Morris, Claude W. dePamphilis, and Jesse R. Lasky [A hemipteran insect reveals new genetic mechanisms and evolutionary insights into tracheal system development]( Lisa Hanna and Aleksandar Popadić Genetics [Widespread organ tolerance to Xist loss and X reactivation except under chronic stress in the gut]( Lin Yang, Eda Yildirim, James E. Kirby, William Press, and Jeannie T. Lee [Coalescence modeling of intrainfection Bacillus anthracis populations allows estimation of infection parameters in wild populations]( W. Ryan Easterday, José Miguel Ponciano, Juan Pablo Gomez, Matthew N. Van Ert, Ted Hadfield, Karoun Bagamian, Jason K. Blackburn, Nils Chr. Stenseth, and Wendy C. Turner [Decision between mitophagy and apoptosis by Parkin via VDAC1 ubiquitination]( Su Jin Ham, Daewon Lee, Heesuk Yoo, Kyoungho Jun, Heejin Shin, and Jongkyeong Chung Immunology and Inflammation [PD-1+ stemlike CD8 T cells are resident in lymphoid tissues during persistent LCMV infection]( Se Jin Im, Bogumila T Konieczny, William H. Hudson, David Masopust, and Rafi Ahmed [Nucleolar localization of RAG1 modulates V(D)J recombination activity]( Ryan M. Brecht, Catherine C. Liu, Helen A. Beilinson, Alexandra Khitun, Sarah A. Slavoff, and David G. Schatz [Centrioles control the capacity, but not the specificity, of cytotoxic T cell killing]( Fella Tamzalit, Diana Tran, Weiyang Jin, Vitaly Boyko, Hisham Bazzi, Ariella Kepecs, Lance C. Kam, Kathryn V. Anderson, and Morgan Huse [IGLV3-21*01 is an inherited risk factor for CLL through the acquisition of a single-point mutation enabling autonomous BCR signaling]( Palash C. Maity, Mayas Bilal, Marvyn T. Koning, Marc Young, Cornelis A. M. van Bergen, Valerio Renna, Antonella Nicolò, Moumita Datta, Eva Gentner-Göbel, Rob S. Barendse, Sebastiaan F. Somers, Ruben A. L. de Groen, Joost S. P. Vermaat, Daniela Steinbrecher, Christof Schneider, Eugen Tausch, Tamara Bittolo, Riccardo Bomben, Andrea Nicola Mazzarello, Giovanni del Poeta, Wilma G. M. Kroes, J. Tom van Wezel, Katharina Imkeller, Christian E. Busse, Massimo Degano, Tamam Bakchoul, Axel Ronald Schulz, Henrik Mei, Paolo Ghia, Konstantia Kotta, Kostas Stamatopoulos, Hedda Wardemann, Antonella Zucchetto, Nicholas Chiorazzi, Valter Gattei, Stephan Stilgenbauer, Hendrik Veelken, and Hassan Jumaa Medical Sciences [Impaired lipid metabolism by age-dependent DNA methylation alterations accelerates aging]( Xin Li, Jiaqiang Wang, Leyun Wang, Guihai Feng, Gen Li, Meixin Yu, Yufei Li, Chao Liu, Xuewei Yuan, Guangxi Zang, Zhihuan Li, Ling Zhao, Hong Ouyang, Qingli Quan, Guangyu Wang, Charlotte Zhang, Oulan Li, Junkai Xiang, Jian-Kang Zhu, Wei Li, Qi Zhou, and Kang Zhang [Unfolding of monomeric lipoprotein lipase by ANGPTL4: Insight into the regulation of plasma triglyceride metabolism]( Kristian K. Kristensen, Katrine Zinck Leth-Espensen, Haydyn D. T. Mertens, Gabriel Birrane, Muthuraman Meiyappan, Gunilla Olivecrona, Thomas J. D. Jørgensen, Stephen G. Young, and Michael Ploug [miR-196b-5p–mediated downregulation of TSPAN12 and GATA6 promotes tumor progression in non-small cell lung cancer]( Guang Liang, Wei Meng, Xiangjie Huang, Wangyu Zhu, Changtian Yin, Canwei Wang, Matteo Fassan, Yun Yu, Masahisa Kudo, Sisi Xiao, Chengguang Zhao, Peng Zou, Yumin Wang, Xiaokun Li, Carlo M. Croce, and Ri Cui Microbiology [Heat-shock proteases promote survival of Pseudomonas aeruginosa during growth arrest]( David W. Basta, David Angeles-Albores, Melanie A. Spero, John A. Ciemniecki, and Dianne K. Newman Neuroscience [Mechanism for neurotransmitter-receptor matching]( Dena R. Hammond-Weinberger, Yunxin Wang, Alex Glavis-Bloom, and Nicholas C. Spitzer [Connect-seq to superimpose molecular on anatomical neural circuit maps]( Naresh K. Hanchate, Eun Jeong Lee, Andria Ellis, Kunio Kondoh, Donghui Kuang, Ryan Basom, Cole Trapnell, and Linda B. Buck [Brain and behavioral alterations in subjects with social anxiety dominated by empathic embarrassment]( Shisei Tei, Jukka-Pekka Kauppi, Kathryn F. Jankowski, Junya Fujino, Ricardo P. Monti, Jussi Tohka, Nobuhito Abe, Toshiya Murai, Hidehiko Takahashi, and Riitta Hari [Synaptotagmin-7 is a key factor for bipolar-like behavioral abnormalities in mice]( Wei Shen, Qiu-Wen Wang, Yao-Nan Liu, Maria C. Marchetto, Sara Linker, Si-Yao Lu, Yun Chen, Chuihong Liu, Chongye Guo, Zhikai Xing, Wei Shi, John R. Kelsoe, Martin Alda, Hongwei Wang, Yi Zhong, Sen-Fang Sui, Mei Zhao, Yiming Yang, Shuangli Mi, Liping Cao, Fred H. Gage, and Jun Yao [Multistep peripherin-2/rds self-assembly drives membrane curvature for outer segment disk architecture and photoreceptor viability]( Michelle L. Milstein, Breyanna L. Cavanaugh, Nicole M. Roussey, Stefanie Volland, David S. Williams, and Andrew F. X. Goldberg [Lack of RAN-mediated toxicity in Huntington’s disease knock-in mice]( Su Yang, Huiming Yang, Luoxiu Huang, Luxiao Chen, Zhaohui Qin, Shihua Li, and Xiao-Jiang Li [Sulfhydration of AKT triggers Tau-phosphorylation by activating glycogen synthase kinase 3β in Alzheimer’s disease]( Tanusree Sen, Pampa Saha, Tong Jiang, and Nilkantha Sen --------------------------------------------------------------- Corrections [Correction for Wang et al., Uncovering the functional residues of Arabidopsis isoprenoid biosynthesis enzyme HDS]( [Correction for Heng et al., BBX4, a phyB-interacting and modulated regulator, directly interacts with PIF3 to fine tune red light-mediated photomorphogenesis]( [Cover] --------------------------------------------------------------- This message was sent to {EMAIL}. [Unsubscribe]( from or [edit]( your subscription for this service. Or by mail: Customer Service * 15575-A Los Gatos Blvd * Los Gatos, CA 95032 * U.S.A. 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