PNAS Table of Contents for 6 December 2016; Vol. 113, No. 49

[PNAS][Proceedings of the National Academy of Sciences] an> [Get seamless access to the worlds most influential scientific research, opinions, and commentary.] [Proceedings of the National Academy of Sciences] [6 December 2016; Vol. 113, No. 49] This Week in PNAS [In This Issue] --------------------------------------------------------------- Inner Workings [Inner Workings: Uncovering the neuron’s internal skeleton] [Front Matter Article] Amber Dance An over-the-shoulder look at scientists at work. --------------------------------------------------------------- Profiles [Profile of Charles M. Rice, Ralf F. W. Bartenschlager, and Michael J. Sofia, 2016 Lasker–DeBakey Clinical Medical Research Awardees] Peter Palese [Profile of William Kaelin, Peter Ratcliffe, and Greg Semenza, 2016 Albert Lasker Basic Medical Research Awardees] Randall S. Johnson --------------------------------------------------------------- Commentaries [Eruptible magma] Calvin F. Miller [The sluggish speed of making abiotic methane] Alexander S. Bradley [Genomic and brain expansion provide ants with refined sense of smell] Patrizia d’Ettorre --------------------------------------------------------------- PNAS Plus Significance Statements [PNAS Plus Significance Statements] Brief statements written by the authors about the significance of their papers. --------------------------------------------------------------- Physical Sciences Chemistry [Graphene oxide-based efficient and scalable solar desalination under one sun with a confined 2D water path] Xiuqiang Li, Weichao Xu, Mingyao Tang, Lin Zhou, Bin Zhu, Shining Zhu, and Jia Zhu Earth, Atmospheric, and Planetary Sciences [Warm storage for arc magmas] [From the Cover] Mélanie Barboni, Patrick Boehnke, Axel K. Schmitt, T. Mark Harrison, Phil Shane, Anne-Sophie Bouvier, and Lukas Baumgartner [Abiotic methane formation during experimental serpentinization of olivine] [From the Cover] Thomas M. McCollom [High-pressure phase of brucite stable at Earth’s mantle transition zone and lower mantle conditions] Andreas Hermann and Mainak Mookherjee [Evidence of isotopic fractionation of natural uranium in cultured human cells] Eduardo Paredes, Emilie Avazeri, Véronique Malard, Claude Vidaud, Pascal E. Reiller, Richard Ortega, Anthony Nonell, Hélène Isnard, Frédéric Chartier, and Carole Bresson [Sex and the shifting biodiversity dynamics of marine animals in deep time] [From the Cover] Andrew M. Bush, Gene Hunt, and Richard K. Bambach Environmental Sciences [US daily temperature records past, present, and future] Gerald A. Meehl, Claudia Tebaldi, and Dennis Adams-Smith Physics [Mechanical bounds to transcriptional noise] Stuart A. Sevier, David A. Kessler, and Herbert Levine [Direct bulk-sensitive probe of 5f symmetry in URu2Si2] [Open Access Article] Martin Sundermann, Maurits W. Haverkort, Stefano Agrestini, Ali Al-Zein, Marco Moretti Sala, Yingkai Huang, Mark Golden, Anne de Visser, Peter Thalmeier, Liu Hao Tjeng, and Andrea Severing [Optical magnetic detection of single-neuron action potentials using quantum defects in diamond] [Open Access Article] John F. Barry, Matthew J. Turner, Jennifer M. Schloss, David R. Glenn, Yuyu Song, Mikhail D. Lukin, Hongkun Park, and Ronald L. Walsworth --------------------------------------------------------------- Social Sciences Psychological and Cognitive Sciences [Linguistic positivity in historical texts reflects dynamic environmental and psychological factors] [Open Access Article] Rumen Iliev, Joe Hoover, Morteza Dehghani, and Robert Axelrod [Preferential interactions promote blind cooperation and informed defection] Alfonso Pérez-Escudero, Jonathan Friedman, and Jeff Gore --------------------------------------------------------------- Biological Sciences Anthropology [Regional diversity on the timing for the initial appearance of cereal cultivation and domestication in southwest Asia] Amaia Arranz-Otaegui, Sue Colledge, Lydia Zapata, Luis Cesar Teira-Mayolini, and Juan José Ibáñez Applied Biological Sciences [Discovery of cofactor-specific, bactericidal Mycobacterium tuberculosis InhA inhibitors using DNA-encoded library technology] Holly H. Soutter, Paolo Centrella, Matthew A. Clark, John W. Cuozzo, Christoph E. Dumelin, Marie-Aude Guie, Sevan Habeshian, Anthony D. Keefe, Kaitlyn M. Kennedy, Eric A. Sigel, Dawn M. Troast, Ying Zhang, Andrew D. Ferguson, Gareth Davies, Eleanor R. Stead, Jason Breed, Prashanti Madhavapeddi, and Jon A. Read [Evidence of isotopic fractionation of natural uranium in cultured human cells] Eduardo Paredes, Emilie Avazeri, Véronique Malard, Claude Vidaud, Pascal E. Reiller, Richard Ortega, Anthony Nonell, Hélène Isnard, Frédéric Chartier, and Carole Bresson Biochemistry [Substrate recognition and catalysis by GH47 α-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway] Yong Xiang, Khanita Karaveg, and Kelley W. Moremen [Methyltransferase-like protein 16 binds the 3′-terminal triple helix of MALAT1 long noncoding RNA] Jessica A. Brown, Charles G. Kinzig, Suzanne J. DeGregorio, and Joan A. Steitz [Characterization of the heterooligomeric red-type rubisco activase from red algae] Nitin Loganathan, Yi-Chin Candace Tsai, and Oliver Mueller-Cajar [Efficient replacement of plasma membrane outer leaflet phospholipids and sphingolipids in cells with exogenous lipids] Guangtao Li, JiHyun Kim, Zhen Huang, Johnna R. St. Clair, Deborah A. Brown, and Erwin London [Phosphate-binding pocket in Dicer-2 PAZ domain for high-fidelity siRNA production] Suresh K. Kandasamy and Ryuya Fukunaga [Molecular basis for the broad substrate selectivity of a peptide prenyltransferase] Yue Hao, Elizabeth Pierce, Daniel Roe, Maho Morita, John A. McIntosh, Vinayak Agarwal, Thomas E. Cheatham III, Eric W. Schmidt, and Satish K. Nair Biophysics and Computational Biology [Fibrous nonlinear elasticity enables positive mechanical feedback between cells and ECMs] Matthew S. Hall, Farid Alisafaei, Ehsan Ban, Xinzeng Feng, Chung-Yuen Hui, Vivek B. Shenoy, and Mingming Wu [Atomistic insight into lipid translocation by a TMEM16 scramblase] Neville P. Bethel and Michael Grabe [Interactions of divalent cations with calcium binding sites of BK channels reveal independent motions within the gating ring] [Open Access Article] Pablo Miranda, Teresa Giraldez, and Miguel Holmgren Ecology [Disturbance is the key to plant invasions in cold environments] Jonas J. Lembrechts, Aníbal Pauchard, Jonathan Lenoir, Martín A. Nuñez, Charly Geron, Arne Ven, Pablo Bravo-Monasterio, Ernesto Teneb, Ivan Nijs, and Ann Milbau [Long-term aggregation of larval fish siblings during dispersal along an open coast] [Open Access Article] Daniel Ottmann, Kirsten Grorud-Colvert, Nicholas M. Sard, Brittany E. Huntington, Michael A. Banks, and Su Sponaugle Evolution [Molecular evidence of keratin and melanosomes in feathers of the Early Cretaceous bird Eoconfuciusornis] Yanhong Pan, Wenxia Zheng, Alison E. Moyer, Jingmai K. O’Connor, Min Wang, Xiaoting Zheng, Xiaoli Wang, Elena R. Schroeter, Zhonghe Zhou, and Mary H. Schweitzer [Sex and the shifting biodiversity dynamics of marine animals in deep time] [From the Cover] Andrew M. Bush, Gene Hunt, and Richard K. Bambach [Large numbers of vertebrates began rapid population decline in the late 19th century] [Open Access Article] Haipeng Li, Jinggong Xiang-Yu, Guangyi Dai, Zhili Gu, Chen Ming, Zongfeng Yang, Oliver A. Ryder, Wen-Hsiung Li, Yun-Xin Fu, and Ya-Ping Zhang [On the (un)predictability of a large intragenic fitness landscape] Claudia Bank, Sebastian Matuszewski, Ryan T. Hietpas, and Jeffrey D. Jensen [Transcriptomics and neuroanatomy of the clonal raider ant implicate an expanded clade of odorant receptors in chemical communication] [From the Cover] Sean K. McKenzie, Ingrid Fetter-Pruneda, Vanessa Ruta, and Daniel J. C. Kronauer Immunology and Inflammation [Paired quantitative and qualitative assessment of the replication-competent HIV-1 reservoir and comparison with integrated proviral DNA] [Open Access Article] Julio C. C. Lorenzi, Yehuda Z. Cohen, Lillian B. Cohn, Edward F. Kreider, John P. Barton, Gerald H. Learn, Thiago Oliveira, Christy L. Lavine, Joshua A. Horwitz, Allison Settler, Mila Jankovic, Michael S. Seaman, Arup K. Chakraborty, Beatrice H. Hahn, Marina Caskey, and Michel C. Nussenzweig [The innate immune receptor Dectin-2 mediates the phagocytosis of cancer cells by Kupffer cells for the suppression of liver metastasis] Yoshitaka Kimura, Asuka Inoue, Sho Hangai, Shinobu Saijo, Hideo Negishi, Junko Nishio, Sho Yamasaki, Yoichiro Iwakura, Hideyuki Yanai, and Tadatsugu Taniguchi [Singular role for T-BET+CXCR3+ regulatory T cells in protection from autoimmune diabetes] Tze Guan Tan, Diane Mathis, and Christophe Benoist [Role of the receptor Mas in macrophage-mediated inflammation in vivo] Anna Hammer, Guang Yang, Juliane Friedrich, Agnes Kovacs, De-Hyung Lee, Katharina Grave, Stefanie Jörg, Natalia Alenina, Janina Grosch, Jürgen Winkler, Ralf Gold, Michael Bader, Arndt Manzel, Lars C. Rump, Dominik N. Müller, Ralf A. Linker, and Johannes Stegbauer [Exon skipping of FcεRIβ eliminates expression of the high-affinity IgE receptor in mast cells with therapeutic potential for allergy] [Open Access Article] Glenn Cruse, Yuzhi Yin, Tomoki Fukuyama, Avanti Desai, Greer K. Arthur, Wolfgang Bäumer, Michael A. Beaven, and Dean D. Metcalfe Medical Sciences [MIF allele-dependent regulation of the MIF coreceptor CD44 and role in rheumatoid arthritis] Seung-Ah Yoo, Lin Leng, Bum-Joon Kim, Xin Du, Pathricia V. Tilstam, Kyung Hee Kim, Jin-Sun Kong, Hyung-Ju Yoon, Aihua Liu, Tian Wang, Yan Song, Maor Sauler, Jurgen Bernhagen, Christopher T. Ritchlin, Patty Lee, Chul-Soo Cho, Wan-Uk Kim, and Richard Bucala Microbiology [An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers] Maggie C. Y. Lau, Thomas L. Kieft, Olukayode Kuloyo, Borja Linage-Alvarez, Esta van Heerden, Melody R. Lindsay, Cara Magnabosco, Wei Wang, Jessica B. Wiggins, Ling Guo, David H. Perlman, Saw Kyin, Henry H. Shwe, Rachel L. Harris, Youmi Oh, Min Joo Yi, Roland Purtschert, Greg F. Slater, Shuhei Ono, Siwen Wei, Long Li, Barbara Sherwood Lollar, and Tullis C. Onstott [Proteomics and comparative genomics of Nitrososphaera viennensis reveal the core genome and adaptations of archaeal ammonia oxidizers] [Open Access Article] Melina Kerou, Pierre Offre, Luis Valledor, Sophie S. Abby, Michael Melcher, Matthias Nagler, Wolfram Weckwerth, and Christa Schleper [Reconstitution of a Mycobacterium tuberculosis proteostasis network highlights essential cofactor interactions with chaperone DnaK] [Open Access Article] Tania J. Lupoli, Allison Fay, Carolina Adura, Michael S. Glickman, and Carl F. Nathan [Epstein–Barr virus super-enhancer eRNAs are essential for MYC oncogene expression and lymphoblast proliferation] Jun Liang, Hufeng Zhou, Catherine Gerdt, Min Tan, Tyler Colson, Kenneth M. Kaye, Elliott Kieff, and Bo Zhao [Genomic sequencing-based mutational enrichment analysis identifies motility genes in a genetically intractable gut microbe] Sena Bae, Olaf Mueller, Sandi Wong, John F. Rawls, and Raphael H. Valdivia Neuroscience [Context-dependent memory traces in the crab’s mushroom bodies: Functional support for a common origin of high-order memory centers] Francisco Javier Maza, Julieta Sztarker, Avishag Shkedy, Valeria Natacha Peszano, Fernando Federico Locatelli, and Alejandro Delorenzi [Emergence of an abstract categorical code enabling the discrimination of temporally structured tactile stimuli] Román Rossi-Pool, Emilio Salinas, Antonio Zainos, Manuel Alvarez, José Vergara, Néstor Parga, and Ranulfo Romo [Optical magnetic detection of single-neuron action potentials using quantum defects in diamond] [Open Access Article] John F. Barry, Matthew J. Turner, Jennifer M. Schloss, David R. Glenn, Yuyu Song, Mikhail D. Lukin, Hongkun Park, and Ronald L. Walsworth [Rapid recovery from the effects of early monocular deprivation is enabled by temporary inactivation of the retinas] [Open Access Article] Ming-fai Fong, Donald E. Mitchell, Kevin R. Duffy, and Mark F. Bear Pharmacology [Loss of β-adrenergic–stimulated phosphorylation of CaV1.2 channels on Ser1700 leads to heart failure] Linghai Yang, Dao-Fu Dai, Can Yuan, Ruth E. Westenbroek, Haijie Yu, Nastassya West, Horacio O. de la Iglesia, and William A. Catterall Physiology [Mechanism of gating by calcium in connexin hemichannels] William Lopez, Jayalakshmi Ramachandran, Abdelaziz Alsamarah, Yun Luo, Andrew L. Harris, and Jorge E. Contreras Plant Biology [Root nodule symbiosis in Lotus japonicus drives the establishment of distinctive rhizosphere, root, and nodule bacterial communities] [Open Access Article] Rafal Zgadzaj, Ruben Garrido-Oter, Dorthe Bodker Jensen, Anna Koprivova, Paul Schulze-Lefert, and Simona Radutoiu [Construction of a male sterility system for hybrid rice breeding and seed production using a nuclear male sterility gene] [Open Access Article] Zhenyi Chang, Zhufeng Chen, Na Wang, Gang Xie, Jiawei Lu, Wei Yan, Junli Zhou, Xiaoyan Tang, and Xing Wang Deng [The earliest maize from San Marcos Tehuacán is a partial domesticate with genomic evidence of inbreeding] [Open Access Article] Miguel Vallebueno-Estrada, Isaac Rodríguez-Arévalo, Alejandra Rougon-Cardoso, Javier Martínez González, Angel García Cook, Rafael Montiel, and Jean-Philippe Vielle-Calzada [Cytoskeleton dynamics control the first asymmetric cell division in Arabidopsis zygote] [Open Access Article] [From the Cover] Yusuke Kimata, Takumi Higaki, Tomokazu Kawashima, Daisuke Kurihara, Yoshikatsu Sato, Tomomi Yamada, Seiichiro Hasezawa, Frederic Berger, Tetsuya Higashiyama, and Minako Ueda Systems Biology [Mechanical bounds to transcriptional noise] Stuart A. Sevier, David A. Kessler, and Herbert Levine --------------------------------------------------------------- Corrections (Online Only) [Correction for Adel et al., Evolutionary alteration of ALOX15 specificity optimizes the biosynthesis of antiinflammatory and proresolving lipoxins] [Correction for Zhang et al., Chilling-induced tomato flavor loss is associated with altered volatile synthesis and transient changes in DNA methylation] --------------------------------------------------------------- SI Correction (Online Only) [Correction to Supporting Information for Adel et al., Evolutionary alteration of ALOX15 specificity optimizes the biosynthesis of antiinflammatory and proresolving lipoxins] [Cover] Open Access From the Cover Inaugural Article Classic Cozzarelli Prize Winner Front Matter --------------------------------------------------------------- This message was sent to {EMAIL}. [Unsubscribe] from or [edit] your subscription for this service. Or by mail: Customer Service * 425 Broadway St * Redwood City, CA 94063 * U.S.A. Copyright © 2016 by the National Academy of Sciences